Insertion junction: CLIP2.004185_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004185
Chromosome:chromosome 12
Location:1637955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486700 FAP271 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 271 3'UTR
Cre12.g486750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCTAAGCTAGGTACGCACATCATGTCTACATACAGTACTACTTGCAG
Internal bar code:GGCGCTTAGGCTGGATATGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTGCTTGTGTGATGTGT
Suggested primer 2:AGGTGTTGTAGGCAGTCACG