Insertion junction: CLIP2.004195_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004195
Chromosome:chromosome 2
Location:5285217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112750 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCAGCCGGCCGCGGCCACGCCAGCGGCGTCGTGGGCCCCGACGGCGA
Internal bar code:ATGTGGTTCGTACTCGAGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCCAGCATGTCCTCATC
Suggested primer 2:GTGTTGTGTCCGTGCTGAAG