Insertion junction: CLIP2.004200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004200
Chromosome:chromosome 16
Location:1926141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCCACGGTCACGGTGGTCTGGCGGTGTGACCGGTGCTGGCACAGTT
Internal bar code:AGCATTAAGTTTCGTTGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2911
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCGAATTGTGTTGCGA
Suggested primer 2:CTTCTGGATGCCCACTGAGG