Insertion junction: CLIP2.004201_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004201
Chromosome:chromosome 1
Location:6893635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGGCGAGCATAAGGGATGGTGAGTAGAAGCTTGCATGTGAAGTGT
Internal bar code:GAATTCGTGGCGCTGCGACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3075
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCATCCATGCCCATTG
Suggested primer 2:CGTATCCGCCTTTTGCTTCG