Insertion junction: CLIP2.004203_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004203
Chromosome:chromosome 12
Location:2815979
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g503550 MEC1,MCS,MECPS1 2-C-methyl-D-erythritol 2%252C4-cyclodiphosphate synthase; (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAACGTTGCCCCTGACGTGTGTGTCGCAGGAGAACATCCGCAACAAC
Internal bar code:TGTTGTACTTAGGGGTAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTATGACTGAAACGCG
Suggested primer 2:ACGCCAGGATTCATGGGTTT