Insertion junction: CLIP2.004204_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004204
Chromosome:chromosome 1
Location:4888373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034050 (1 of 1) PTHR11751:SF428 - PROTEIN NKAT-1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGTGCGTCAGAAAGCACGAGGATTGGAAAATGCAAAGCGTGCACGC
Internal bar code:TTCGGAGGGCGCAGGTTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCACCGTCATATCTGG
Suggested primer 2:AGGAGCAGGAGGAGAAGGAG