Insertion junction: CLIP2.004208_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004208
Chromosome:chromosome 3
Location:735899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145987 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGGCGGGGCCGGTGGTGCTGGAGCGGCCTGCCAACGCCCGCTGCGA
Internal bar code:TTAATAGTGCATCCTCATTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGACATGACGATACCGGG
Suggested primer 2:CTCCTGCTTCTGCTCCTGTC