Insertion junction: CLIP2.004223_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004223
Chromosome:chromosome 2
Location:4714002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108200 CGL80 Conserved in the Green Lineage; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGTGCACAGCTCGGCTCGGGACTGTTGACCAGCTAGGGAGGCAGCA
Internal bar code:ACCTACCGATATTTTGGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4005
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGCAGTCCGTGAGCTC
Suggested primer 2:TTGCAAGCAGATCGGTTCCT