Insertion junction: CLIP2.004228_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004228
Chromosome:chromosome 10
Location:2142443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433350 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCGGGCAGCGGGCACACGCAGCAGGCGAGTCCGCAGCAGCGAGGCA
Internal bar code:GTGCGTTGCTTCGGTTGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4396
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGCACGTAGGCACAGA
Suggested primer 2:CCTGCAGGTGTGTGTGGTAT