Insertion junction: CLIP2.004235_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004235
Chromosome:chromosome 1
Location:6195620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044150 (1 of 1) 2.1.1.181 - 23S rRNA (adenine(1618)-N(6))-methyltransferase / rRNA large subunit methyltransferase F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAGGGGAAACTTTGTAGTTGCCAAAAACAAACTGTAACATAGCGTCG
Internal bar code:TAAGACTCTGGAGCTAAGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGTGCGCTCCTTTCTT
Suggested primer 2:TTTGTAAAGCGCCCAACTGC