Insertion junction: CLIP2.004238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004238
Chromosome:chromosome 1
Location:313679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001750 TIG1 chloroplast trigger factor; (1 of 1) PTHR30560 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTATCG
Internal bar code:TGGAAGGGAGCAACTGTACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGGTGAGTGTGGGTGTG
Suggested primer 2:CACTTACTATAGCCGCCGCA