Insertion junction: CLIP2.004240_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004240
Chromosome:chromosome 12
Location:3248037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499500 SAC3,SNRK2B snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343:SF207 - SERINE/THREONINE-PROTEIN KINASE SRK2C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCAGTCGGCACCGGGGTCGCGGGTCGGCACGCCGGCGTACCTGGCCC
Internal bar code:CGTGCTTGTTAGGTACTGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1782
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGGAACTCTACGGTAGC
Suggested primer 2:AACAGCGATGGTGGGTACAG