Insertion junction: CLIP2.004245_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004245
Chromosome:chromosome 3
Location:5893731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188650 PLAP2,PLP2 Plastid lipid associated protein 2; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGGCGGCGCGCCTGGAGGGGCAGTGAGCTGCTGGGCTTTTGGGCGCG
Internal bar code:AGCGCTCATTCCACTGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCTCGTCAACACCCTC
Suggested primer 2:TTTGAGGCTCAAAACGCGTG