Insertion junction: CLIP2.004248_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004248
Chromosome:chromosome 17
Location:5454394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738950 (1 of 102) PF01753 - MYND finger (zf-MYND) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGTCCGCACATTCTCTGCACTGCCTGCCACTGCCGCTCCTGTTCCTG
Internal bar code:AGTTTATGTAATACACGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCACAGGTGAGTTTGTGT
Suggested primer 2:CTTGGGTCCATTCAGCACCT