Insertion junction: CLIP2.004248_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004248
Chromosome:chromosome 17
Location:5457256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738950 (1 of 102) PF01753 - MYND finger (zf-MYND) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGTGTCCTGTCCTGCGACCGCGTCCTGTCCTGCTGGAAATACAGT
Internal bar code:AGTTTATGTAATACACGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:306
LEAP-Seq percent confirming:2.77778
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGGTCCATTCAGCACCT
Suggested primer 2:TGGCACAGGTGAGTTTGTGT