Insertion junction: CLIP2.004253_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004253
Chromosome:chromosome 2
Location:1103310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080650 HSP90B (1 of 1) PTHR11528//PTHR11528:SF45 - HEAT SHOCK PROTEIN 90 // ENDOPLASMIN HOMOLOG; Heat shock protein 90B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACACACGCGGCAGACTGGCGCGGACACTCCAGCAGCAGCAGGCAAC
Internal bar code:CGCGTGATGTGTGATCGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1254
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACATGGAGCGCATCATG
Suggested primer 2:TCTTCCTGGAGGCCTAGGTC