Insertion junction: CLIP2.004257_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004257
Chromosome:chromosome 6
Location:3248346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277100 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAAATTTCATTGTAATTGGGCCAGATAGGGCCTGCGGGGCTTGCAGCC
Internal bar code:GTATCGTTGGGTTCACCATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1453
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCACATCCACATCCCC
Suggested primer 2:GGAACTGAGGAGTGTGGTGG