Insertion junction: CLIP2.004272_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004272
Chromosome:chromosome 10
Location:5629823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458700 (1 of 6) PF07719//PF13414 - Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGGAGAGGGGCCGGCGTCAGCGCGGGAGGACGGCGGCCAGGCGGA
Internal bar code:TCCTAAAGTTGTCGGCGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3151
LEAP-Seq percent confirming:98.0952
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCTTCTTTCGTCAGCGT
Suggested primer 2:ACTGTTTGGGGCAGTGTTCA