Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | + |
Strain: | CLIP2.004274 |
Chromosome: | chromosome 3 |
Location: | 5542900 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre03.g185150 | (1 of 11) IPR023109 - Integrase/recombinase, N-terminal | 3'UTR | |
Cre03.g185200 | CPL3,MPA6 | (1 of 3) PTHR11668//PTHR11668:SF267 - SERINE/THREONINE PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED; protein ser/thr phosphatase | 5'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AGCTCCAATGCTCAAGTACACAGCTTGATGCCTCGGTTTTCTACTAGCAT |
Internal bar code: | ATACATATGTTCCTACCGTGGT |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 2001 |
LEAP-Seq percent confirming: | 100.0 |
LEAP-Seq n confirming: | 90 |
LEAP-Seq n nonconfirming: | 0 |
LEAP-Seq n unique pos: | 90 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | GCGCTGTTTCCTAGGACTGT |
Suggested primer 2: | TGCATGTTGTTTGGTGCTCG |