Insertion junction: CLIP2.004289_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004289
Chromosome:chromosome 12
Location:6616539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538850 (1 of 1) PTHR13720//PTHR13720:SF9 - WD-40 REPEAT PROTEIN // ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE ELP-1; Similar to Echinoderm Microtubule Associated Protein Like 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGTGCGGGCGCAGGCCCTAGTCCTGGCCCTGGCCCTGGCGCTGGT
Internal bar code:GGGGGGTTGAGTTCAATATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGTGCAGCTCCTAGGC
Suggested primer 2:GCTTTCATCGCGTTCCATCC