Insertion junction: CLIP2.004294_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004294
Chromosome:chromosome 10
Location:1429287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427950 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTCGGGGGAGCACTTGAAACCCACCCTCGCCAGCGGACTGTCACTG
Internal bar code:ATAGCACTGCAGGGCATCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTCTGCAATGGCGATG
Suggested primer 2:CTATCAGCTGCTCCCAGTCG