Insertion junction: CLIP2.004295_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004295
Chromosome:chromosome 2
Location:2424913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091400 CLPB2 (1 of 1) IPR001270//IPR003593//IPR003959//IPR024064//IPR027417 - ClpA/B family // AAA+ ATPase domain // ATPase, AAA-type, core // FdhE-like // P-loop containing nucleoside triphosphate hydrolase; ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATACACCGCAACGATACCGTGTGTTTGTGTGAGGGAGAGCTCTGTGCT
Internal bar code:CGACTTTTTTCGTTTAATTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAGCATCGGGTGGGTAA
Suggested primer 2:CCTGACAGTACCACCAGCAG