Insertion junction: CLIP2.004312_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004312
Chromosome:chromosome 3
Location:4195343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCACCCACCTCCGACAGCGGCGCCAGGCGGTGTGGGCACATGTCC
Internal bar code:GCACCCGGTGACGGATTAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2155
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCACCCACATCCTCAAT
Suggested primer 2:TACGGGAAGAGGGAAGGGAG