Insertion junction: CLIP2.004315_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004315
Chromosome:chromosome 9
Location:3506931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396289 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGGGCGAGACCTCCACAGAGCGCTGTCTGACTGCCAGCAACGACAT
Internal bar code:TTTGTTAAGTAGTTATCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2659
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGCTGCTGAGATTGC
Suggested primer 2:TGCTGGTGTATGGCTTGAGG