Insertion junction: CLIP2.004315_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004315
Chromosome:chromosome 9
Location:3506941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396289 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCGCTGCTTTCCGGGTGAACTCCTCCAGTAACGGTACGCCCTGTAA
Internal bar code:CGGGAGCTGAATGTCGCCAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGGTGTATGGCTTGAGG
Suggested primer 2:GATGCTGCTGCTGAGATTGC