Insertion junction: CLIP2.004318_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004318
Chromosome:chromosome 6
Location:5884140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289600 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre06.g289650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCTCACAGTTCACGGAACACGGTAATATTCACTTGTTCATGATGCA
Internal bar code:ATCATTTAGCATCGTACGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4743
LEAP-Seq percent confirming:82.2222
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACATTTGGGTGCATGGG
Suggested primer 2:CGAGGATGTGACTGTGGGTC