Insertion junction: CLIP2.004324_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004324
Chromosome:chromosome 6
Location:3514237
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g278117 CPLD7 Conserved in the Plant Lineage and Diatoms; (1 of 98) IPR023214 - HAD-like domain 3'UTR
Cre06.g278118 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGTAGCCTCAAGAAGTGTCGTGCAACATGAATGCCAAGTGACTGG
Internal bar code:TCGGAGGGGCTGTGTGGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAAAGGTGTGTTGCCCA
Suggested primer 2:TCGTGGAGGACAAACTCAGC