Insertion junction: CLIP2.004329_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004329
Chromosome:chromosome 5
Location:378169
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g243550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGTGCGGATGCCAGGATAGTCCCAGCACACGTGTAGTGCCGACCAGT
Internal bar code:GTTGGTGGGATGTTCGACACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2276
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAATGCTACCCACGAA
Suggested primer 2:CCATTCAAGGTGCGCTATGC