Insertion junction: CLIP2.004331_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004331
Chromosome:chromosome 4
Location:1546354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213500 TMG8 (1 of 1) PTHR23417//PTHR23417:SF18 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE // SUBFAMILY NOT NAMED; tRNA (guanine-N7)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAAATCGCATGGGGGTTGGGATGGGGATGGGGATGGGGATGGGGAAG
Internal bar code:GTGAAGCAAGAAATTACATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACTCCCACTGGTTCCAC
Suggested primer 2:GAGTGCCGTAGTGGTGTGAA