Insertion junction: CLIP2.004335_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004335
Chromosome:chromosome 16
Location:3685889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678808 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTATGGCTCTTCTCGTCGTAAGACGCATGGCTTTTGCTCATTTGCCT
Internal bar code:GGGTGGGTAGGTATCAAGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1731
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGCCCTTCCCGTATTT
Suggested primer 2:CCCCGACTACTCCACTAGCT