Insertion junction: CLIP2.004346_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004346
Chromosome:chromosome 12
Location:7741009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554600 CGL146 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGAGCCTAGTGAAGCCGGTGACGCCTGACGGCGGCTACCTGGCCGC
Internal bar code:TTTTGAACGGCAACAGGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1728
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCAAACATGGCAATGG
Suggested primer 2:CAAGCACAGGGTTTTCGTGG