Insertion junction: CLIP2.004350_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004350
Chromosome:chromosome 3
Location:3506399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167450 (1 of 22) PF13640 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGATCGCCCTTCGGAGTTTGAAGTTAACTACCGTACGCCCGTACCCAC
Internal bar code:CTTGAGGCTTGGACTATGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2708
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCTTCACAGACTGGTC
Suggested primer 2:AGTGAGCTTGGTGTCTCTGC