Insertion junction: CLIP2.004352_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004352
Chromosome:chromosome 8
Location:2448771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCACGAGCGAGGCGTGGGAGTCCCAGAGGTGCGGGTTTTAACGTCAT
Internal bar code:TGCCACGCGGGGTGAGACTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTTGAAGCTGGTCGTC
Suggested primer 2:GCATGGGGTTGAGAGTGGAA