Insertion junction: CLIP2.004352_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004352
Chromosome:chromosome 8
Location:2448773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACATGGCAAGGGGCAGGAAAGCGTAGTCGCGAGCTCGTGATGGAACA
Internal bar code:GTCTTGGTTAGCAGAATGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGGGTTGAGAGTGGAA
Suggested primer 2:TCACCTTGAAGCTGGTCGTC