Insertion junction: CLIP2.004355_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004355
Chromosome:chromosome 17
Location:3530503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724600 PAO2,TIC55-2 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTATCTTGTGACGAGCGGATCCATGTTAAACCTCCCAGGACGGCAACT
Internal bar code:TCGGTACGAGCTGTTTGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1466
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCTGCCAGCATTCTCT
Suggested primer 2:CCGGCCCCACATATCCATAC