Insertion junction: CLIP2.004358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004358
Chromosome:chromosome 1
Location:84663
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g000550 Putative nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTACACCCCTCGCTGGGTGCGCCTAGCGGTACTGGCCGATGCGCGCC
Internal bar code:GGATGGGTGGCTCGTCACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCCTCCTCCTCAC
Suggested primer 2:GGGTCTGACATACACCGCAT