Insertion junction: CLIP2.004359_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004359
Chromosome:chromosome 17
Location:1010868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703200 (1 of 3) IPR001071 - Cellular retinaldehyde binding/alpha-tocopherol transport CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACCAAGATCGCCGCCATTGACCAGGTGCGCGCCGCTGCGCGCGCCC
Internal bar code:GTGCCGCGGGCTATGGGACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGATAATGAGCGCGGGGA
Suggested primer 2:ACCCGCACTTCTACCACATG