Insertion junction: CLIP2.004360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004360
Chromosome:chromosome 1
Location:6196435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044150 (1 of 1) 2.1.1.181 - 23S rRNA (adenine(1618)-N(6))-methyltransferase / rRNA large subunit methyltransferase F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCGGCGTGCTGGACGGGCGGGTGCTGCTGCAGCGGCTGCAGGCGCT
Internal bar code:AAGGTGGCTCATGCTTCCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:6353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTAGCTCACAGCCAGG
Suggested primer 2:CCCAAATAAGGCGATGCAGC