Insertion junction: CLIP2.004373_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004373
Chromosome:chromosome 8
Location:2352657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g371400 CPL16 zinc finger family protein; (1 of 1) PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGGGTTTTGCGGGGGTTCCAATCATGATTAATTAAGAAGTGAAGG
Internal bar code:GCGCTGGGAGTAAACTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCATAGCGCGTACCGTACAC
Suggested primer 2:GACGAAGGGCTGGGTGATAG