Insertion junction: CLIP2.004374_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004374
Chromosome:chromosome 6
Location:1428142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259900 ATPC1,ATPC Chloroplast ATP synthase gamma chain; (1 of 1) K02115 - F-type H+-transporting ATPase subunit gamma (ATPF1G, atpG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTCCGAGAAGGGGCGGCCGTTCACCACAGCCTCCTGAGCACGGCGGA
Internal bar code:TAGTGTAAGTAATGTTTTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTTATGCCGGGTACGCTTGT
Suggested primer 2:TCCGTGCGATTCCCTTTCAA