Insertion junction: CLIP2.004376_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004376
Chromosome:chromosome 6
Location:4806974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279976 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGAAGTATGAATGTTGAATGTCAACTTGTAAAAGTGTGTGACTTGGT
Internal bar code:CGCTGTTGGATAGAAGGTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTTTGAGGGCAAGGTG
Suggested primer 2:GTGAAAGTTGGCTGCTTGGG