Insertion junction: CLIP2.004376_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004376
Chromosome:chromosome 6
Location:4841901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGTAAAGAGCCATTCAGGTGCATGCCATCTGCCTGGACTGCACTCAT
Internal bar code:TTCGGGGTGCCCTTGACGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTAGCCACACGTTCAC
Suggested primer 2:TTGGAGCTGTCCTACCGGTA