Insertion junction: CLIP2.004382_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004382
Chromosome:chromosome 1
Location:1746289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009650 BUG25 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; basal body protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAAGGAAAAGGTAAGGAGTAATCTTCTCGAATCCTCGGCTTCTCACGA
Internal bar code:ATTAGGGGGAGCCGAGGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5835
LEAP-Seq percent confirming:84.7826
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATGCTGCCTGGACACAT
Suggested primer 2:TCAAACAGCGTCCATCCGAA