Insertion junction: CLIP2.004385_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004385
Chromosome:chromosome 1
Location:2606353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACACGCTGGAGCTGACGCTGATGGACGAGGACACGCTCACACGCGAC
Internal bar code:GTGCTCAGCGCTTTTTGCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATCTGCCAATCCCCAC
Suggested primer 2:CATATCCCAAATGCAGGCGC