Insertion junction: CLIP2.004387_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004387
Chromosome:chromosome 17
Location:3333820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722700 (1 of 2) PF04893 - Yip1 domain (Yip1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCTGCAGCTTAGCATGGATCCTACTACCTGGAGTACGCTTAATTGC
Internal bar code:CTTCCAGTGTCATAGGTCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTACCCGCGTCTTTTCT
Suggested primer 2:GGCTGGCTGGAAGTTTGTTG