Insertion junction: CLIP2.004387_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004387
Chromosome:chromosome 17
Location:3333822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722700 (1 of 2) PF04893 - Yip1 domain (Yip1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTGTGAGGGCTGTCATGGAAGCCCAGAAGAGGAGGTCATGAGGTGT
Internal bar code:CTTCCAGTGTCATAGGTCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4971
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGGCTGGAAGTTTGTTG
Suggested primer 2:ACGTTACCCGCGTCTTTTCT