Insertion junction: CLIP2.004388_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004388
Chromosome:chromosome 12
Location:1998866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510850 CGL73 expressed protein Conserved in the Green Lineage; (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGGCGCGGCACAAGTATGGCTTCCGCCCGGTGCGCCTGGGCAAGCG
Internal bar code:TCTCGTATTTTTTTGCTCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:14.0351
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCATTTCCACCCCAGAA
Suggested primer 2:TCGGCCAGATGGAGACTACA