Insertion junction: CLIP2.004392_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004392
Chromosome:chromosome 8
Location:853206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361250 (1 of 7) 2.4.1.255 - Protein O-GlcNAc transferase / OGTase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCCCTGCTGCCCTCACAACCTTGCACATATCTGTCTCTCGTCGCCC
Internal bar code:CGGGGTGCGTTTCTGGATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGGCTTTGACTACGGC
Suggested primer 2:GAGCAGCGATGAATGCAGTG