Insertion junction: CLIP2.004406_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004406
Chromosome:chromosome 12
Location:1443793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488350 (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1) 3'UTR
Cre12.g488351 (1 of 1) IPR001368//IPR009030//IPR011641 - TNFR/NGFR cysteine-rich region // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGATCCAGGCTATTTGGTAGCGGGCTAGCGGCTTTGGGAATTTCCAT
Internal bar code:TAGTTCATACGTTCAATTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGCTGTGATAAGCAGG
Suggested primer 2:CCTGGAGAGCCCATGTTTGT