Insertion junction: CLIP2.004415_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004415
Chromosome:chromosome 16
Location:2876047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663050 (1 of 1) PTHR10751//PTHR10751:SF38 - GUANYLATE BINDING PROTEIN // GUANYLATE-BINDING FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTACATGCATTAAGTTTACGAAGTGAAGTCGTAGCCAGGTACAAAG
Internal bar code:GTAATATGCGCCACCAAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCCCGAGTAAAGGTGCC
Suggested primer 2:GGTATTAAGGAGCCCCGAGC